Publication: Stable and reproducible homologous recombination enables CRISPR-based engineering in the fungus Rhizopus microsporus
Authors
Lax Molina, Carlos ; Navarro Mendoza, María Isabel ; Pérez Arques, Carlos ; Navarro Ros, Eusebio ; Nicolás Molina, Francisco Esteban ; Garre Mula, Victoriano
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Facultades de la UMU::Facultad de Biología
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Publisher
Cell Press
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DOI
https://doi.org/10.1016/j.crmeth.2021.100124
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info:eu-repo/semantics/article
Description
Abstract
Mucormycosis is a lethal and emerging disease that has lacked a genetic model fulfilling both high virulence and the possibility of performing stable and reproducible gene manipulation by homologous recombination (HR). Here, we developed a new methodology to successfully perform HR in Rhizopus microsporus. We isolated an uracil auxotrophic recipient strain and optimized the critical steps in the genetic transformation of this fungus. This was followed by an adaptation of a plasmid-free CRISPR-Cas9 system coupled with microhomology repair templates. We reproducibly generated stable mutants in the genes leuA and crgA, encoding a 3-isopropylmalate dehydratase and an ubiquitin ligase, respectively. Our new genetic model showed that mutations in the gene pyrF, a key virulence gene in several bacterial and fungal pathogens, correlated with an avirulent phenotype in an immunocompetent murine host. This was reverted by gene complementation, showing the broad possibilities of our methodology.
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Mucormycosis , Mucorales , Homologous recombination , Genetic model , Rhizopus microsporus , CRISPR , Virulence , pyrF , leuA , crgA
Citation
Lax, C., Navarro-Mendoza, M. I., Pérez-Arques, C., Navarro, E., Nicolás, F. E., & Garre, V. (2021). Stable and reproducible homologous recombination enables CRISPR-based engineering in the fungus Rhizopus microsporus. Cell reports methods, 1(8), 100124. https://doi.org/10.1016/j.crmeth.2021.100124
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